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Which miRNAs sit inside a host gene's intron
Stem-loop
Overlaps
Host transcript
cel-lin-4
intron
F59G1.4
cel-mir-2
intron
F16A11.3a
cel-mir-2
intron
F16A11.3b
cel-mir-2
intron
F16A11.3c
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The query
PREFIX mb: <https://w3id.org/rete/mirbase#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> SELECT ?stemLoop ?overlap ?transcript WHERE { ?h mb:transcriptContext ?c ; rdfs:label ?stemLoop . ?c mb:overlapType ?overlap ; mb:transcriptName ?transcript . FILTER(?overlap = "intron") } LIMIT 50
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