reteplayground
Select

Which miRNAs sit inside a host gene's intron

SELECT ?stemLoop ?overlap ?transcript WHERE {
  ?h mb:transcriptContext ?c ; rdfs:label ?stemLoop .
  ?c mb:overlapType ?overlap ; mb:transcriptName ?transcrFILTER(?overlap = "intron")
}
LIMIT 50
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The query

PREFIX mb: <https://w3id.org/rete/mirbase#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> SELECT ?stemLoop ?overlap ?transcript WHERE { ?h mb:transcriptContext ?c ; rdfs:label ?stemLoop . ?c mb:overlapType ?overlap ; mb:transcriptName ?transcript . FILTER(?overlap = "intron") } LIMIT 50

rete playground · documentation · github.com/caviri/rete